BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023B11SP1|AL428014
(999 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1709 1916 0.0
>3x_Contig1709
Length = 16948
Score = 1916 bits (966), Expect = 0.0
Identities = 980/982 (99%), Gaps = 2/982 (0%)
Strand = Plus / Minus
Query: 1 gatcagattaaccattacggaagcgatcatgtagtgaaattttcgttaattgggtattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11505 gatcagattaaccattacggaagcgatcatgtagtgaaattttcgttaattgggtattct 11446
Query: 61 ctaggtgggttaatctgtagatatgcgttgggtgttttgtaccaggcgcagacgttcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11445 ctaggtgggttaatctgtagatatgcgttgggtgttttgtaccaggcgcagacgttcaag 11386
Query: 121 aagaacgatatagagcttgtcaatttcatcactttttgcacccctcatgttggggtctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11385 aagaacgatatagagcttgtcaatttcatcactttttgcacccctcatgttggggtctta 11326
Query: 181 gctcccggtaataacgtagcagtgaacctatttaacattatcgttccattagtgttgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11325 gctcccggtaataacgtagcagtgaacctatttaacattatcgttccattagtgttgggg 11266
Query: 241 aatagtgggaaacagatgttcttaaaagataaatataatggttatcctttgttatacgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11265 aatagtgggaaacagatgttcttaaaagataaatataatggttatcctttgttatacgtg 11206
Query: 301 atgagttcaccaagttcggtattttataaagcgctgaaacaattcaaatacagagcctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11205 atgagttcaccaagttcggtattttataaagcgctgaaacaattcaaatacagagcctta 11146
Query: 361 tatgcaaatattattaacgacaagagaaccgcgtggtggacttcgggtatctcaaaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11145 tatgcaaatattattaacgacaagagaaccgcgtggtggacttcgggtatctcaaaaaat 11086
Query: 421 gacccattcttcgatgtcaatgaaaggaacggccttggaaggttccaatttgttcaagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11085 gacccattcttcgatgtcaatgaaaggaacggccttggaaggttccaatttgttcaagga 11026
Query: 481 tatgagcccgtgatcttgaatcataactcacctttgttcatcgcacctgttgccgatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11025 tatgagcccgtgatcttgaatcataactcacctttgttcatcgcacctgttgccgatgaa 10966
Query: 541 atggattcatcttatgacgaattggaagagttacgaaaggaaaacgaaatagatccacag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10965 atggattcatcttatgacgaattggaagagttacgaaaggaaaacgaaatagatccacag 10906
Query: 601 gactattatttcttgaattactggttcagtaagatgttacggtggattgctgtctttatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10905 gactattatttcttgaattactggttcagtaagatgttacggtggattgctgtctttatt 10846
Query: 661 aacttaatcatcattaccccactttggtttatctggtttatcatatctggtataatggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10845 aacttaatcatcattaccccactttggtttatctggtttatcatatctggtataatggaa 10786
Query: 721 acttgtaaatctaccgttagggccactacatttgcaaggaaatattccatgtattttata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10785 acttgtaaatctaccgttagggccactacatttgcaaggaaatattccatgtattttata 10726
Query: 781 accgaagtgcttgatatttcaaccgacaggactgagtccaacgacgatacgttttccata 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10725 accgaagtgcttgatatttcaaccgacaggactgagtccaacgacgatacgttttccata 10666
Query: 841 tcatcacccactttgtttgagccagccgaaagtaactacgaacttcgaatcgaacactct 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10665 tcatcacccactttgtttgagccagccgaaagtaactacgaacttcgaatcgaacactct 10606
Query: 901 ttgaccgatcagagagataatttaattgaaagtttgttcgacgcaattgaaagg-aagaa 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 10605 ttgaccgatcagagagataatttaattgaaagtttgttcgacgcaattgaaaggaaagaa 10546
Query: 960 acgcgaactgc-acggtagaaa 980
||||||||||| ||||||||||
Sbjct: 10545 acgcgaactgcaacggtagaaa 10524
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7440
Number of Sequences: 1807
Number of extensions: 7440
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 999
length of database: 10,358,551
effective HSP length: 16
effective length of query: 983
effective length of database: 10,329,639
effective search space: 10154035137
effective search space used: 10154035137
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)